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Part 1: Document Description
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Citation |
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Title: |
Sampling sites, databases for SDMs and R scripts for MLPE models for "Landscape characteristics influence regional dispersal in a high-elevation specialist migratory bird, the water pipit Anthus spinoletta" |
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Identification Number: |
doi:10.13130/RD_UNIMI/VTSVZQ |
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Distributor: |
UNIMI Dataverse |
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Date of Distribution: |
2023-01-05 |
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Version: |
1 |
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Bibliographic Citation: |
Ceresa, Francesco; Brambilla, Mattia; Kvist, Laura; Vitulano, Severino; Pes, Michele; Tomasi, Laura; Pedrini, Paolo; Hilpold, Andreas; Kranebitter, Petra, 2023, "Sampling sites, databases for SDMs and R scripts for MLPE models for "Landscape characteristics influence regional dispersal in a high-elevation specialist migratory bird, the water pipit Anthus spinoletta"", https://doi.org/10.13130/RD_UNIMI/VTSVZQ, UNIMI Dataverse, V1 |
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Citation |
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Title: |
Sampling sites, databases for SDMs and R scripts for MLPE models for "Landscape characteristics influence regional dispersal in a high-elevation specialist migratory bird, the water pipit Anthus spinoletta" |
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Identification Number: |
doi:10.13130/RD_UNIMI/VTSVZQ |
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Authoring Entity: |
Ceresa, Francesco (Museum of Nature South Tyrol, Bolzano, Italy) |
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Brambilla, Mattia (Università degli Studi di Milano, Dept. Environmental Science and Policy) |
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Kvist, Laura (University of Oulu, Ecology and Genetics Research Unit, Oulu, Finland) |
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Vitulano, Severino (Studio Pteryx, Basiano MI, Italy) |
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Pes, Michele (Museum of Nature South Tyrol, Bolzano, Italy) |
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Tomasi, Laura (Museum of Nature South Tyrol, Bolzano, Italy) |
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Pedrini, Paolo (Museo delle Scienze, Trento, Italy) |
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Hilpold, Andreas (Eurac Research, Institute for Alpine Environment, Bolzano, Italy) |
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Kranebitter, Petra (Museum of Nature South Tyrol, Bolzano, Italy) |
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Distributor: |
UNIMI Dataverse |
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Access Authority: |
Brambilla, Mattia |
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Depositor: |
Brambilla, Mattia |
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Date of Deposit: |
2023-01-05 |
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Holdings Information: |
https://doi.org/10.13130/RD_UNIMI/VTSVZQ |
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Study Scope |
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Keywords: |
Earth and Environmental Sciences, Medicine, Health and Life Sciences |
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Abstract: |
Location of sampling sites, databases (species-with-data files in RDS format) and scripts associated with the paper. Two R scripts for Maximum Likelihood Population Effects models are provided: 1. script_MLPE: R script used to fit maximum likelihood population effects models, considering the entire study area; 2. script_MLPE_sub_areas: R script used to fit maximum likelihood population effects models, considering two sub-areas separately. Three files with coordinates of sampled individuals are provided: 1. WP_coord_N: sampling sites coordinates for all individuals captured in the northern sub-area (EPSG:3035 - ETRS89 / LAEA Europe); 2. WP_coord_S: sampling sites coordinates for all individuals captured in the southern sub-area (EPSG:3035 - ETRS89 / LAEA Europe); 3. WP_coordinates: sampling sites coordinates for all individuals (EPSG:3035 - ETRS89 / LAEA Europe). Two files in RDS format (R software, package SDMtune) with testing and training locations, as well as background points, for building Species Distribution Models (EPSG:3035 - ETRS89 / LAEA Europe). |
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Methodology and Processing |
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Sources Statement |
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Data Access |
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Other Study Description Materials |
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Related Publications |
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Citation |
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Identification Number: |
https://doi.org/10.1111/mec.16853 |
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Bibliographic Citation: |
Ceresa, F., Brambilla, M., Kvist, L., Vitulano, S., Pes, M., Tomasi, L., Pedrini, P., Hilpold, A., & Kranebitter, P. (2023). Landscape characteristics influence regional dispersal in a high-elevation specialist migratory bird, the water pipit Anthus spinoletta. Molecular Ecology, 32, 1875–1892. |
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Label: |
script_MLPE_sub_areas.txt |
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Text: |
R script used to fit maximum likelihood population effects models, considering two sub-areas separately |
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Notes: |
text/plain |
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Label: |
script_MLPE.txt |
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Text: |
R script used to fit maximum likelihood population effects models, considering the entire study area |
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Notes: |
text/plain |
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Label: |
SWD_water_pipit_testing.RDS |
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Text: |
species-with-data file for SDM for Anthus spinoletta: test dataset |
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Notes: |
application/gzip |
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Label: |
SWD_water_pipit_training.RDS |
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Text: |
species-with-data file for SDM for Anthus spinoletta: train dataset |
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Notes: |
application/gzip |
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Label: |
WP_coordinates.txt |
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Text: |
sampling sites coordinates for all individuals (EPSG:3035 - ETRS89 / LAEA Europe) |
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Notes: |
text/plain |
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Label: |
WP_coord_N.txt |
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Text: |
sampling sites coordinates for all individuals captured in the northern sub-area (EPSG:3035 - ETRS89 / LAEA Europe) |
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Notes: |
text/plain |
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Label: |
WP_coord_S.txt |
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Text: |
sampling sites coordinates for all individuals captured in the southern sub-area (EPSG:3035 - ETRS89 / LAEA Europe) |
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Notes: |
text/plain |